Share_it Repositorium


Strukturelle und funktionelle Analyse des
mRNA-3´-Prozessierungs-Komplex (Dataset)
-------------------------------------------

Dataset Description
===================


Data Files
----------

Cross-linking:
Raw-files are grouped by analysed protein complex.
MS-data were analysed by MeroX 1.6.6.6 and MeroX-resultsfiles
(*.zhrm) are named after corresponding raw file.


CFI.zip
	--> CFI.fasta
	--> CFI_DSBU_1.zhrm
	--> CFI_DSBU_1.zip
	--> CFI_DSBU_2.zhrm
	--> CFI_DSBU_2.zip
	--> CFI_LCSDA_1.zhrm
	--> CFI_LCSDA_1.zip
	--> CFI_LCSDA_2.zhrm
	--> CFI_LCSDA_2.zip

CFII.zip
	--> CFII.fasta
	--> CFII_1.zhrm
	--> CFII_1.zip
	--> CFII_1_2.zhrm
	--> CFII_1_2.zip
	--> CFII_2.zhrm
	--> CFII_2.zip
	--> CFII_2_2.zhrm
	--> CFII_2_2.zip

CstF.zip
	--> CstF.fasta
	--> CstF_1.zhrm
	--> CstF_1.zip
	--> CstF_1_2.zhrm
	--> CstF_1_2.zip
	--> CstF_2.zhrm
	--> CstF_2.zip
	--> CstF_2_2.zhrm
	--> CstF_2_2.zip

EndonukleaseKomplex.zip
	--> EN.fasta
	--> EN_1.zhrm
	--> EN_1.zip
	--> EN_1_2.zhrm
	--> EN_1_2.zip
	--> EN_2.zhrm
	--> EN_2.zip
	--> EN_2_2.zhrm
	--> EN_2_2.zip

PolyA-Komplex.zip

InGel_Verdau
	--> 01.zip
	--> 02.zip
	--> 03.zip
	--> 04.zip
	--> 05.zip
	--> 06.zip
	--> 07.zip
	--> 08.zip
	--> 09.zip
	--> mPSF.fasta
	--> PolyA_InGel_01.zhrm
	--> PolyA_InGel_02.zhrm
	--> PolyA_InGel_03.zhrm
	--> PolyA_InGel_04.zhrm
	--> PolyA_InGel_05.zhrm
	--> PolyA_InGel_06.zhrm
	--> PolyA_InGel_07.zhrm
	--> PolyA_InGel_08.zhrm
	--> PolyA_InGel_09.zhrm
	
InLoesung_Verdau

	--> 01.zip
	--> 02.zip
	--> 02_2.zip
	--> 03.zip
	--> 03_2.zip
	--> 04.zip
	--> 04_2.zip
	--> 05.zip
	--> 05_2.zip
	--> 06.zip
	--> 06_2.zip
	--> 07.zip
	--> 07_2.zip
	--> 08.zip
	--> 08_2.zip
	--> PolyA_InSolution_01.zhrm
	--> PolyA_InSolution_02.zhrm
	--> PolyA_InSolution_02_2.zhrm
	--> PolyA_InSolution_03.zhrm
	--> PolyA_InSolution_03_2.zhrm
	--> PolyA_InSolution_04.zhrm
	--> PolyA_InSolution_04_2.zhrm
	--> PolyA_InSolution_05.zhrm
	--> PolyA_InSolution_05_2.zhrm
	--> PolyA_InSolution_06.zhrm
	--> PolyA_InSolution_06_2.zhrm
	--> PolyA_InSolution_07.zhrm
	--> PolyA_InSolution_07_2.zhrm
	--> PolyA_InSolution_08.zhrm
	--> PolyA_InSolution_08_2.zhrm


Pulldowns
---------
Raw-files are grouped in experimental subfolders.
iBAQ values of all identified proteins are summed
in "Results.xlsx"


FLAG_Buffer_1.zip
FLAG_Buffer_2.zip
FLAG_Buffer_3.zip
FLAG_Buffer_4.zip
FLAG_CstF_1.zip
FLAG_CstF_2.zip
FLAG_EN_1.zip
FLAG_EN_2.zip
FLAG_FEGP_1.zip
FLAG_FEGP_2.zip
FLAG_TLong_1.zip
FLAG_TLong_2.zip


NiNTA.zip
	--> NiNTA_Buffer_1.zip
	--> NiNTA_Buffer_2.zip
	--> NiNTA_CFII_1.zip
	--> NiNTA_CFII_2.zip
	--> NiNTA_mPSF_1.zip
	--> NiNTA_mPSF_2.zip

Strep.zip
	--> CFI_1.zip
	--> CFI_2.zip
	--> CFI_Buffer.zip

Results.xlsx


Documentation Files
-------------------
README.txt


Instructions
============
All raw files were compressed using zip and the bzip2
algorithm without encryption.

To use the data upack the zip files to the destination
folder in your local system.


Potential issues
================
Due to the size of the deposited files, it is
recommended that users check the checksum files
for each downloaded item. Checksum of all data
files can be requested from the Share_it 
administrators.


Quality Checks
==============

Research data sets published in Share_it undergo
a basic review prior to publishing and release. 
Depending on the individual nature of each dataset
some curation procedures will be conducted.

The following tasks were undertaken:

. Data files have been checked for consistency
and accuracy


. Metadata was generated for the dataset and
a Digital Object Identifier (DOI) assigned. 

. A review for possible data protection,
confidentiality issues or legal conflicts was
undertaken with the author(s) prior to the
publication of the data.


============
Share_it Repositorium Team
Universitäts- und Landesbibliothek Sachsen-Anhalt 
Martin-Luther-Universität Halle-Wittenberg
14.10.2020